mm_PlotArray: Plot Array Plot individuals and optionally mean form

In ehrlichd/moRphomenses: Geometric Morphometric Tools to Align, Scale, and Compare "Shape" of Menstrual Cycle Hormones

Plot Array Plot individuals and optionally mean form

Description

Plot Array Plot individuals and optionally mean form

Usage

mm_PlotArray(
  A,
  MeanShape = TRUE,
  AllCols = NULL,
  MeanCol = NULL,
  plot_type = c("lines", "points"),
  lbl = NULL,
  yr = NULL,
  axis_labels = FALSE
)

Arguments

A	An array to be plotted
MeanShape	Logical. Should the Mean Shape be calculated and plotted
AllCols	Either a single color for all individuals, or a vector specifying colors for each individual. If NULL (default) individuals will be plotted in grey
MeanCol	A single color for the mean shape. If Null (default) mean shape will be plotted in black
plot_type	Should the data be plotted as points or lines.
lbl	A title (main =) for the plot. If NULL (default) the name of the array will be used.
yr	Y-range, in the form c(0,100)
axis_labels	Should units be printed along the axis. Defaults to FALSE to maximize the profile shape.

Value

Plot individual(s) profile(s) in the default graphics device.

ehrlichd/moRphomenses documentation built on Dec. 13, 2024, 8:36 a.m.