read_sam: read_sam
In einarhjorleifsson/fishvise: Miscalaneous set of functions related fish stock assessment work
Description
Reads results from sam. Equivalent to FLSAM::SAM2FLR except
returns a list rather than an FLR-object.
Usage
1
read_sam(run.dir, ctrl, admb.stem = "sam", ibya)
Arguments
run.dir
Path to which the files are read from.
ctrl
If missing (default) the relevant information are obtained
from the files in the run.dir. If specified this must be a FLSAM.control
object containing the parameters employed in the assessment.
admb.stem
The name of the admb executable (ie without the .dat, .exe etc)
ibya
A long data.frame containing input values. If missing (default)
the returned rbya data.frame does not contain the full input data.
einarhjorleifsson/fishvise documentation built on May 16, 2019, 1:26 a.m.
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Description
Reads results from sam. Equivalent to FLSAM::SAM2FLR except returns a list rather than an FLR-object.
Usage
1 | read_sam(run.dir, ctrl, admb.stem = "sam", ibya)
|
Arguments
run.dir |
Path to which the files are read from. |
ctrl |
If missing (default) the relevant information are obtained from the files in the run.dir. If specified this must be a FLSAM.control object containing the parameters employed in the assessment. |
admb.stem |
The name of the admb executable (ie without the .dat, .exe etc) |
ibya |
A long data.frame containing input values. If missing (default) the returned rbya data.frame does not contain the full input data. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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