elagralinska/APLpackage: Association Plots

This package performs correspondence analysis (CA) and allows to identify cluster-specific genes using Association Plots (AP). Additionally, APL computes the cluster-specificity scores for all genes which allows to rank the genes by their specificity for a selected cell cluster of interest.

README.md

Vignettes Man pages API and functions Files

Package details
Bioconductor views	DimensionReduction RNASeq Sequencing SingleCell StatisticalMethod
Maintainer
License	GPL (>= 3)
Version	0.99.0
Package repository	View on GitHub
Installation	Install the latest version of this package by entering the following in R: `install.packages("remotes") remotes::install_github("elagralinska/APLpackage")`