diamondplot: Diamond plots of MSE output

In elisvb/CCAM: Censored Catch Assessment Model

Diamond plots of MSE output

Description

Diamond plots of MSE output

Usage

diamondplot(x, what, ylab = what, xlab = "Management Procedure",
  hline = NULL, area = NULL, year, IE = NULL, IEnames = NULL,
  legnames = NULL, threshold = NULL, data = FALSE, ratio = FALSE,
  OMtype = FALSE)

## S3 method for class 'ccamforecast'
diamondplot(x, ...)

## S3 method for class 'forecastset'
diamondplot(x, what, ylab = what,
  xlab = "Management Procedure", hline = NULL, area = NULL,
  year = "all", IE = NULL, IEnames = NULL, legnames = NULL,
  threshold = NULL, data = FALSE, ratio = FALSE, OMtype = FALSE)

Arguments

x	the object(s) returned from ccam.forecast
what	statistic returned from ccam.forecast
ylab	y label
xlab	x label
hline	plot horizontal line(s)
area	color plot underneath this yintercept
year	year for which the statistics needs to be plotted NULL Takes median all years 'numeric vector' Takes median of specified years 'threshold' Takes year at which threshold is reached (see threshold param) 'percyear' Takes percentage of years where threshold is reached (see threshold param) 'zone' Makes a facet grid in which the statistic is grouped by zone (critical, healthy or cautious)
IE	Which IE to plot (if vector)? Defaults to collapsed IE. Can be numeric or string (grep).
IEnames	character string containing alternative names for the IEs
legnames	character string containing alternative names for the legend (OM types)
threshold	if year=TRUE than a threshold can be specified and the year at which it is reached becomes the y value for 'what'
data	logical. return data instead of plot.
ratio	logical. devide by LRP?
OMtype	logical. OMbase/core/whatever present?

Details

performance (what) by management procedure, IE and OM type. OM type is defined by the OM name (numbers and 'OM' are removed).

elisvb/CCAM documentation built on March 13, 2023, 6:55 a.m.