gm_mean: CLR transformation function Performs centered log ratio...
In elittmann/erictools:

CLR transformation function Performs centered log ratio transformation to normalize count data

1	gm_mean(x, na.rm = TRUE)

t <- get.otu.melt(phy)
t %>%
group_by(sample) %>%
summarize(pctseqs=clr(pctseqs))

elittmann/erictools documentation built on Feb. 2, 2020, 11:01 p.m.

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