plotStateExpression: Visualize feature expression distribution per state

Description Usage Arguments Details Value Author(s) See Also Examples

Description

Violin plots showing the expression distribution of a feature per state.

Usage

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plotStateExpression(sce, feature_name)

Arguments

sce

A SingleCellExperiment object

feature_name

The name of the feature to be visualized

Details

Each data point displays the feature’s expression value in a single sample. A violine plot shows the density (mirrored on the y-axis) of the expression distribution per sample.

Value

A ggplot object

Author(s)

Daniel C. Ellwanger

See Also

ggplot states

Examples

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# Example data
data(exSCE)

plotStateExpression(exSCE, feature_name="feature_1")

elldc/CellTrails documentation built on May 16, 2020, 4:40 a.m.