RunAlign: RunAlign a wrapper to the 'align' function

View source: R/DNArunners.R

RunAlignR Documentation

RunAlign a wrapper to the align function

Description

RunAlign a wrapper to the align function

Usage

RunAlign(sbjFile, species, version, nThreads)

Arguments

sbjFile

string full path to the R1.fastq or or gz file

species

the species you whant to use, it should be stored in your database pls see ShowSpecies

version

the code indicating the genome+annotation pair

nThreads

integer, number of CPUs to be used


elmerfer/Aligners documentation built on May 27, 2023, 5:05 a.m.