|Visualiation of a custom annotation over nonlinear...
|Estimating optimal K using silhouette
|Visualize the clustering over nonliner dimensionality...
|Down- and oversample data
|identification of gene markers for all clusters
|Identification of gene markers for a cluster or two arbitrary...
|Heatmap visualization of the gene markers identified by...
|Visualize gene expression over nonlinear dimensionality...
|Hierarchical clustering using the Ward's method
|Clustering projection using logistic regression from the...
|A toy dataset with 500 cells downsampled from the pbmc3k...
|Elbow plot of the standard deviations of the principal...
|Prepare 'SingleCellExperiment' object for 'ILoReg' analysis
|Renaming all clusters at once
|Renaming one cluster
|Iterative Clustering Projection (ICP) clustering
|Run ICP runs parallerly
|PCA transformation of the joint probability matrix
|Barnes-Hut implementation of t-Distributed Stochastic...
|Uniform Manifold Approximation and Projection (UMAP)
|Selecting K clusters from hierarchical clustering
|Select top or bottom N genes based on a selection criterion
|Gene expression visualization using violin plots
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