eMIRNA.Features: eMIRNA Function for calculating Features from provided...
In emarmolsanchez/eMIRNA_Rmodules: eMIRNA: A comprehensive pipeline for discovery and annotation of microRNAs in animal species
Description
Usage
Arguments
Examples
Description
eMIRNA.Features Returns a data.frame with calculated Features from each
of the provided filtered sequences. FASTA file must be previously filtered by
length and by Secondary Folding Structure, prior to be subjected to the
eMIRNA.Features module.
Usage
1
eMIRNA.Features(file, prefix, rescale = TRUE)
Arguments
file
Path to FASTA file previously filtered by length and by Secondary
Folding Structure.
file.
prefix
Desired name for Features .csv file output.
rescale
Boolean for performing rescaling of calculated Features.
If rescale = TRUE, features will be rescaled. If rescale = FALSE,
features will remain not rescaled.
Examples
1
2
eMIRNA.Features("~/eMIRNA/FilterStructure_Results/Candidates_filter_nloop.fa",
"FASTA")
emarmolsanchez/eMIRNA_Rmodules documentation built on May 14, 2019, 5 a.m.
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Description Usage Arguments Examples
Description
eMIRNA.Features Returns a data.frame with calculated Features from each
of the provided filtered sequences. FASTA file must be previously filtered by
length and by Secondary Folding Structure, prior to be subjected to the
eMIRNA.Features module.
Usage
1 | eMIRNA.Features(file, prefix, rescale = TRUE)
|
Arguments
file |
Path to FASTA file previously filtered by length and by Secondary
Folding Structure.
|
prefix |
Desired name for Features .csv file output. |
rescale |
Boolean for performing rescaling of calculated Features.
If |
Examples
1 2 | eMIRNA.Features("~/eMIRNA/FilterStructure_Results/Candidates_filter_nloop.fa",
"FASTA")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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