eMIRNA.Train: eMIRNA Function for training SVM classifier.

In emarmolsanchez/eMIRNA_Rmodules: eMIRNA: A comprehensive pipeline for discovery and annotation of microRNAs in animal species

Description

eMIRNA.Train Returns a SVM classifier for predicting miRNAs.

Usage

eMIRNA.Train(pos, neg, imbalance = "none")

Arguments

pos	Path to .csv or R object with calculated Features from known positive miRNA sequences, filtered by length and Secondary Folding Structure. file.
neg	Path to .csv or R object with calculated Features from other known negative non-coding sequences, filtered by length and Secondary Folding Structure. file.
imbalance	Imbalance correction algorithm for equilibrating positive and negative sequences.

Examples

eMIRNA.Train(Positive, Negative, imbalance = "smote")

emarmolsanchez/eMIRNA_Rmodules documentation built on May 14, 2019, 5 a.m.