emvolz-phylodynamics/phydynR: Model-based coalescent simulation and likelihood for phylodynamic inference
This package provides functions for defining infectious diseae models or ecological process models in terms of ODEs or SDEs; functions for simulating trees conditional on process models; and functions for computing likelihoods of trees conditional on a process model.
Getting started
Browse package contents
Package details |
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| Author | Erik Volz |
| Maintainer | Erik Volz <erik@erikvolz.info> |
| License | GPL |
| Version | 0.2.2 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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