SEIJR_reproduction_number: Compute R0, growth rate and doubling time for the SEIJR.0.0...
In emvolz-phylodynamics/sarscov2Rutils: Scripts to support preparation and analysis of SARS CoV 2 analyses
Description
Usage
Arguments
Value
View source: R/combineAndSummarize0.R
Description
Also prints to the screen a markdown table with the results. This can be copied into reports.
The tau & p_h parameters _must_ be in the log files. If that's not the case, you can add fixed values like this: X$seir.tau <- 74; X$seir.p_h <- .2
Usage
1
SEIJR_reproduction_number(X, gamma0 = 73, gamma1 = 121.667, precision = 3)
Arguments
gamma0
Rate of leaving incubation period ( per capita per year )
gamma1
Rate of recovery (per capita per year)
Value
Data frame with tabulated results and CI
emvolz-phylodynamics/sarscov2Rutils documentation built on Nov. 17, 2020, 9:22 a.m.
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Description Usage Arguments Value
View source: R/combineAndSummarize0.R
Description
Also prints to the screen a markdown table with the results. This can be copied into reports. The tau & p_h parameters _must_ be in the log files. If that's not the case, you can add fixed values like this: X$seir.tau <- 74; X$seir.p_h <- .2
Usage
1 | SEIJR_reproduction_number(X, gamma0 = 73, gamma1 = 121.667, precision = 3)
|
Arguments
gamma0 |
Rate of leaving incubation period ( per capita per year ) |
gamma1 |
Rate of recovery (per capita per year) |
Value
Data frame with tabulated results and CI
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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