cutie_treedater: Running treedater on ML trees on HPC or work stations with...
In emvolz-phylodynamics/sarscov2Rutils: Scripts to support preparation and analysis of SARS CoV 2 analyses
Description
Usage
Arguments
Value
Description
Collapses small edges and resolves polytomies randomly many times
Usage
1
cutie_treedater(tr, ntres = 10, threads = 2, ncpu = 5)
Arguments
threads
number of treedater fits to run in parallel
ncpu
number of cpus to use for each treedater fit
Value
a bunch of treedater trees corresponding to random resolutions of ML tree
emvolz-phylodynamics/sarscov2Rutils documentation built on Nov. 17, 2020, 9:22 a.m.
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Description Usage Arguments Value
Description
Collapses small edges and resolves polytomies randomly many times
Usage
1 | cutie_treedater(tr, ntres = 10, threads = 2, ncpu = 5)
|
Arguments
threads |
number of treedater fits to run in parallel |
ncpu |
number of cpus to use for each treedater fit |
Value
a bunch of treedater trees corresponding to random resolutions of ML tree
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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