plot.bootTreedater: Plots lineages through time and confidence intervals...

In emvolz/treedater: Fast Molecular Clock Dating of Phylogenetic Trees with Rate Variation

Plots lineages through time and confidence intervals estimated by bootstrap.

Description

Plots lineages through time and confidence intervals estimated by bootstrap.

Usage

## S3 method for class 'bootTreedater'
plot(x, t0 = NA, res = 100, ggplot = FALSE, cumulative = FALSE, ...)

Arguments

x	A bootTreedater object produced by *parboot* or *boot*
t0	The lower bound of the time axis to show
res	The number of time points on the time axis
ggplot	If TRUE, will return a plot made with the ggplot2 package
cumulative	If TRUE, will show only decreasing lineages through time
...	Additional arg's are passed to *ggplot* or *plot*

emvolz/treedater documentation built on March 25, 2022, 11:13 a.m.