In ergonyc/omicser: NDCN Omics Browser

knitr::opts_chunk$set(echo = TRUE)

Share the database

Now that you have successfully curated and configured the database you may choose to share with your collaborators. There are several options:

• Send a zip file: Share all database, configuration, and customization files as a zip file. Your collaborators will need to unzip the file, install the omicser package (and requirements) and launch the browser to view the application locally on their own computer's R / RStudio.

• Host the application: Launch the browser on a shared network server that can run R indefinitely. Your collaborators will be able to access the browser via a URL.

Please be congnizant of possible data privacy and security issues when choosing a method for sharing your application. These issues are specific to your data and research questions.

Troubleshooting

• The app didn't open in my browser! What do I do? If the app does not load automatically, copy the URL shown into your Console (e.g., http://127.0.0.1:6329) and paste it into your browser of choice. (Chrome recommended.)

• I closed my browser window! Do I need to relaunch my app? No, you don't need to relaunch. Follow the instructions for the question above to view your app in a browser.

ergonyc/omicser documentation built on June 15, 2022, 3:02 p.m.