updateClus-methods: Update the label of peaks in 'bed' slot of an 'chip' object
In ericaenjoy3/TdAvg: Tornado and Average Plots of Coverage Signals Centered on Peaks
Description
Usage
Arguments
Value
Description
Update
the label of peaks (the 4th column) in bed slot of an chip object,
according to the integer position (IntIdx),
by the new lables (subclus).
Usage
1
2
3
4
updateClus(chip.obj, IntIdx, subclus)
## S4 method for signature 'chip'
updateClus(chip.obj, IntIdx, subclus)
Arguments
chip.obj
A chip object.
IntIdx
An integer/numeric vector specify a subset or all of labels in the bed slot of chip object to be updated by given factor/character vector of subclus.
subclus
A factor/character vector of the same length as IntIdx specifying new labels for peak clusters.
Value
An updated chip object
ericaenjoy3/TdAvg documentation built on May 8, 2019, 3:45 p.m.
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Description Usage Arguments Value
Description
Update
the label of peaks (the 4th column) in bed slot of an chip object,
according to the integer position (IntIdx),
by the new lables (subclus).
Usage
1 2 3 4 | updateClus(chip.obj, IntIdx, subclus)
## S4 method for signature 'chip'
updateClus(chip.obj, IntIdx, subclus)
|
Arguments
chip.obj |
A |
IntIdx |
An integer/numeric vector specify a subset or all of labels in the |
subclus |
A factor/character vector of the same length as IntIdx specifying new labels for peak clusters. |
Value
An updated chip object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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