tcpl_to_model_dat: Cast tcpl output to model format
In ericwatt/eapath: Computational Models for Estrogen and Androgen Receptor Activity

Description Usage Arguments Details Value

tcpl_to_model_dat preps tcpl output for model input.

1	tcpl_to_model_dat(dat, pathway)

`dat`	output from tcpl level 5 data
`pathway`	string, specify ER or AR

# This function is to take a pipeline formatted data.table (long format, one m4id per row) and convert to the form needed by the ER model (one chemical per row, multiple columns for assays) Requires a tcplPrepOtpt(tcplLoadData()) formatted data.table also requires an assay_order (list of assay) so that NAs can be converted assumed already subset (one unique row per code)

dat_cast a data.table cast into the correct format for the model

ericwatt/eapath documentation built on May 13, 2017, 7:18 p.m.