via_filter: Filter hit calls in AR dataset by antagonist viability
In ericwatt/eapath: Computational Models for Estrogen and Androgen Receptor Activity
Description
Usage
Arguments
Value
Description
via_filter removes the hit call for AR antagonist assays if the
viability assay is a more potent hit.
Usage
1
via_filter(dat, dat_via)
Arguments
dat
data.table with AR assay results
dat_via
data.table with TOX21_AR_BLA_Antagonist_viability and
TOX21_AR_LUC_MDAKB2_Antagonist2_viability results
Value
dat_via_filt, which is input data.table dat with added column
modl_ga_via and hitc for TOX21_AR_BLA_Antagonist_ratio and
TOX21_AR_LUC_MDAKB2_Antagonist2 assays changed to 0 if viability result is
more potent.
ericwatt/eapath documentation built on May 16, 2019, 8:41 a.m.
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Description Usage Arguments Value
Description
via_filter removes the hit call for AR antagonist assays if the
viability assay is a more potent hit.
Usage
1 | via_filter(dat, dat_via)
|
Arguments
dat |
data.table with AR assay results |
dat_via |
data.table with TOX21_AR_BLA_Antagonist_viability and TOX21_AR_LUC_MDAKB2_Antagonist2_viability results |
Value
dat_via_filt, which is input data.table dat with added column modl_ga_via and hitc for TOX21_AR_BLA_Antagonist_ratio and TOX21_AR_LUC_MDAKB2_Antagonist2 assays changed to 0 if viability result is more potent.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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