make_matrix_X_l: compute the matrix X_l given allele frequencies and kappa

In eriqande/CKMRsim: Inference of Pairwise Relationships Using Likelihood Ratios

compute the matrix X_l given allele frequencies and kappa

Description

Ha! I did this initially using R straight up and even tried to make it reasonably vectorized, but the damn thing took forever and was incredible space-inefficient. Ergo, we are going after it using Rcpp. The genotypes are ordered in rows and columns in the way as described in the paper.

Usage

make_matrix_X_l(p, kappa)

Arguments

p	vector of allele frequencies
kappa	a 3-vector of the Cotterman coefficients

eriqande/CKMRsim documentation built on Aug. 2, 2024, 7:23 a.m.