Detecting contaminated samples from SNP genotypes

Global functions | |
---|---|

P_likelihood | Man page Source code |

Pcontam | Man page Source code |

ROC | Source code |

SNPcontam | Man page |

SNPcontam-package | Man page |

analyze_MCMC | Man page Source code |

analyzed_mixed_MCMC | Source code |

cdfg_port_samples | Man page |

contam_MCMC | Source code |

hetero | Source code |

likelihood | Man page Source code |

lratio | Source code |

mixed_MCMC | Man page Source code |

multi_pop_MCMC | Source code |

prepare_base_and_mix_for_mixed_MCMC | Man page Source code |

random_gene | Source code |

single_pop_MCMC | Source code |

swfsc_chinook_baseline | Man page |

threshold | Source code |

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