Man pages for eriqande/SNPcontam
Detecting contaminated samples from SNP genotypes

analyze_MCMCMCMC function for determing contamination probability and...
cdfg_port_samplesChinook genotype data from 1974 individuals sampled by CA...
likelihoodProbability of genotype given contamination and...
mixed_MCMCMCMC function for determing contamination proportions and...
PcontamCompute likelihoods for populations of origin
P_likelihoodCompute likelihoods for populations of origin
prepare_base_and_mix_for_mixed_MCMCPrepares a baseline and mixture file of genotypes for mixed...
SNPcontamDetecting contaminated samples from SNP genotypes
swfsc_chinook_baselineChinook genotype data from 8031 individuals across much of...
eriqande/SNPcontam documentation built on May 13, 2017, 8:20 p.m.