eriqande/snps2assays: Prepare SNP Assay Orders from ddRAD or RAD Loci

An R-package to help prepare Fluidigm SNPtype assays (or similar assays) from reduced-representation library loci (for example ddRAD or RAD loci). You pass in a a data frame of variable sites, a data frame of desired SNPs, and a data frame of the consensus sequences of each ddRAD or RAD locus, and it returns the information needed to order the assays.

Getting started

Package details

AuthorWho wrote it
MaintainerWho to complain to <[email protected]>
LicensePublic Domain, CC0 1.0
Version0.1
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("eriqande/snps2assays")
eriqande/snps2assays documentation built on May 13, 2017, 8:22 p.m.