snps2assays: snps2assays: a package for preparing SNPtype-like assay...
In eriqande/snps2assays: Prepare SNP Assay Orders from ddRAD or RAD Loci
Description
This package provides one main function, assayize, that takes, as
input, data frames of:
all the known variation in different (typically short) contigs,
the SNPs you want to turn into assays,
the sequences of all the contigs (or at least the ones that you want to turn into
assays).
It also provides two other functions, grab_vcf and
grab_fasta for reading (possibly gzipped) VCF and fasta
files into data frames appropriate for use in assayize.
eriqande/snps2assays documentation built on Oct. 9, 2020, 5:22 p.m.
R Package Documentation
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description
This package provides one main function, assayize, that takes, as
input, data frames of:
all the known variation in different (typically short) contigs,
the SNPs you want to turn into assays,
the sequences of all the contigs (or at least the ones that you want to turn into assays).
It also provides two other functions, grab_vcf and
grab_fasta for reading (possibly gzipped) VCF and fasta
files into data frames appropriate for use in assayize.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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