barplot_qpcr: This function visualizes qPCR results as bar plot.

In erkutilaslan/biovizR: A Package to Visualize Biological Data Designed for Wet Lab Scientists.

This function visualizes qPCR results as bar plot.

Description

This function visualizes qPCR results as bar plot.

Usage

barplot_qpcr(
  qpcr_data,
  type = "biorad",
  group1 = "",
  group2 = "",
  group3 = "",
  group4 = "",
  group5 = "",
  ref1 = "",
  ref2 = "",
  goi = "",
  tech_rep = 3,
  stat = TRUE,
  test = "t-test",
  generate_table = FALSE
)

Arguments

qpcr_data	Input qPCR data to visualize.
type	Default biorad. Specify model of thermocycler.
group1	Control group.
group2	Target group.
group3	Target group.
group4	Target group.
group5	Target group.
ref1	Reference gene one.
ref2	Reference gene two.
goi	Gene of interest.
tech_rep	Number of technical replicates. Optional if consideration of technical replicates for statistical testing is desired.
stat	Default TRUE. Enable or disable statistical analysis.
test	Default t-test. Select statistical testing method.
generate_table	Default False. Set to True to create a table with the results everytime run the function.

Value

A bar plot of qPCR results.

erkutilaslan/biovizR documentation built on June 18, 2022, 6:22 p.m.