read_chromeleon: Chromeleon ASCII reader

In ethanbass/chromConverter: Chromatographic File Converter

Chromeleon ASCII reader

Description

Reads 'Thermo Fisher Chromeleon™ CDS' files into R.

Usage

read_chromeleon(
  path,
  format_out = c("matrix", "data.frame", "data.table"),
  data_format = c("wide", "long"),
  read_metadata = TRUE,
  metadata_format = c("chromconverter", "raw"),
  decimal_mark = NULL
)

Arguments

path	Path to file
format_out	Class of output. Either matrix, data.frame, or data.table.
data_format	Whether to return data in wide or long format.
read_metadata	Whether to read metadata from file.
metadata_format	Format to output metadata. Either chromconverter or raw.
decimal_mark	Which character is used as the decimal separator in the file. By default, decimal mark will be detected automatically, but it can also be manually set as "." or ",".

Value

A chromatogram in the format specified by format_out. (retention time x wavelength).

Author(s)

Ethan Bass

ethanbass/chromConverter documentation built on Jan. 14, 2025, 2:11 a.m.