read_waters_raw: Read 'Waters' RAW

In ethanbass/chromConverter: Chromatographic File Converter

Read 'Waters' RAW

Description

Parser for reading 'Waters MassLynx (.raw) files into R.

Usage

read_waters_raw(
  path,
  format_out = c("matrix", "data.frame", "data.table"),
  data_format = c("wide", "long"),
  read_metadata = TRUE,
  metadata_format = c("chromconverter", "raw")
)

Arguments

path	Path to .raw file.
format_out	Class of output. Either matrix, data.frame, or data.table.
data_format	Either wide (default) or long.
read_metadata	Logical. Whether to attach metadata.
metadata_format	Format to output metadata. Either chromconverter or raw.

Value

A chromatogram in the format specified by format_out (retention time x wavelength).

Note

For now this parser only reads 1D chromatograms (not mass spectra or DAD data) and does not support parsing of metadata from 'Waters' RAW files.

Author(s)

Ethan Bass

ethanbass/chromConverter documentation built on Jan. 14, 2025, 2:11 a.m.