write_chroms: Write chromatograms

In ethanbass/chromConverter: Chromatographic File Converter

Write chromatograms

Description

Writes chromatograms to disk in the format specified by export_format: either (mzml), cdf or csv.

Usage

write_chroms(
  chrom_list,
  path_out,
  export_format = c("mzml", "cdf", "csv"),
  what = "",
  force = FALSE,
  show_progress = TRUE,
  verbose = getOption("verbose"),
  ...
)

Arguments

chrom_list	A list of chromatograms.
path_out	Path to directory for writing files.
export_format	Format to export files: either mzml, cdf, or csv.
what	What to write. Either MS1 or chrom.
force	Logical. Whether to overwrite existing files. Defaults to TRUE.
show_progress	Logical. Whether to show progress bar. Defaults to TRUE.
verbose	Logical. Whether to print verbose output.
...	Additional arguments to write function.

Value

No return value. The function is called for its side effects.

Side effects

Exports a chromatogram in the file format specified by export_format in the directory specified by path_out.

Author(s)

Ethan Bass

See Also

Other write functions: write_andi_chrom(), write_mzml()

ethanbass/chromConverter documentation built on March 29, 2025, 5:22 a.m.