R/data.R

In etheleon/metamaps: MetamapsDB: R package for querying Metagenomics data against Metabolic Pathways and Gene Centric Assemblies

#' Top500kos
#'
#' Dataset showing the top 500 KEGG Orthologs (KOS)
#'
#' @format A vector of 500 KOs based on KOs ranked by abundance, not sure if the vector is ranked.
#'
#'
'top500kos'

#' nitrogenMetab
#'
#' Igraph object containing KOs and compounds involved in nitrogen metabolism
#'
#' @format 83 nodes and 251 edges. 50 KOs and 33 compounds
#'
'nitrogenMetab'


#' singleCopyGenes'
#'
#' Vector list showing Single Copy Genes
#'
#' @format 31 KEGG ids ko:KXXXXX
#'
'scg'