compute_fdr: Compute the FDR

compute_fdrR Documentation

Compute the FDR

Description

Computes the FDR at the PrSM, sequence, proteoform, accession, and gene levels.

Usage

compute_fdr(x)

Arguments

x

A data.table that contains decoy proteins.

Value

A list containing the FDR and counts at the PrSM, sequence, proteoform, accession, and gene levels. The FDR values and counts for each level are also printed when the function is called. All FDR values are reported as percentages.

Author(s)

Evan A Martin


evanamartin/TopPICR documentation built on Dec. 9, 2022, 8:05 p.m.