.level_biotypes | R Documentation |
ENSEMBL GTFs provide biotype information for genes/transcripts. These are
things like "3prime_overlapping_ncRNA", "antisense", ..., "protein_coding",
etc. This function turns the "biotype"-vector x
into a factor with levels
in (roughly) the order we care to "unique"-ify these levels. Ie. if a gene
has a "protein_coding" annotation, we will care to keep that one over one
of its annotations which categorize it as a "processed_transcript"
.level_biotypes(x)
x |
a |
a factor version of x
, with levels(x)
in approximately the order
we care about.
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