newLogMu: Returns the matrix of logarithm of mean parameters

In fedeago/NewWave: Negative binomial model for scRNA-seq

Returns the matrix of logarithm of mean parameters

Description

Given an object that describes a matrix of negative binomial distributions, returns the matrix of logarithm of mean parameters.

Usage

newLogMu(object)

Arguments

object

an object that describes a matrix of negative binomial distributions.

Details

Note that although the user interface of newFit requires a J x n matrix, internally this is stored as a n x J matrix (i.e., samples in row and genes in column). Hence the parameter matrix returned by this function is of n x J dimensions.

Value

the matrix of logarithms of mean parameters

Examples

a <- newmodel(n=5, J=10)
newLogMu(a)

fedeago/NewWave documentation built on March 28, 2022, 5:46 a.m.