Files in federicomarini/ideal

Interactive Differential Expression AnaLysis

.Rbuildignore

.github/workflows/R-CMD-check.yaml

CODE_OF_CONDUCT.md

DESCRIPTION

LICENSE

LICENSE.md

NAMESPACE

NEWS.md R/genesignatures.R R/ggplotCounts.R R/goseqTable.R R/helpers.R R/iSEE_plug.R R/ideal-pkg.R R/ideal.R R/plot_ma.R R/plot_volcano.R R/res2tbl.R R/table-enhancers.R R/zzz.R README.md

_pkgdown.yml

inst/CITATION

inst/extdata/about.md inst/extdata/datainput.md

inst/extdata/design_commas.txt

inst/extdata/design_semicolons.txt

inst/extdata/design_spaces.txt

inst/extdata/design_tabs.txt

inst/extdata/help_datasetup.md inst/extdata/help_eda.md inst/extdata/help_funcanalysis.md inst/extdata/help_genefinder.md inst/extdata/help_overview.md inst/extdata/help_plots.md inst/extdata/help_report.md inst/extdata/help_results.md inst/extdata/help_signatureexplorer.md inst/extdata/help_welcome.md

inst/extdata/ideal_logo_v2.png

inst/extdata/instructions.md

inst/extdata/intro_countsoverview.txt

inst/extdata/intro_datasetup.txt

inst/extdata/intro_firsttour.txt

inst/extdata/intro_funcanalysis.txt

inst/extdata/intro_genefinder.txt

inst/extdata/intro_plots.txt

inst/extdata/intro_report.txt

inst/extdata/intro_results.txt

inst/extdata/intro_signatureexplorer.txt

inst/extdata/irt.Rmd inst/extdata/welcome.md

inst/www/ideal.png

inst/www/ideal_logo_v2.png

man/deseqresult2DEgenes.Rd man/deseqresult2tbl.Rd

man/figures/ideal.png

man/ggplotCounts.Rd man/goseqTable.Rd man/ideal-pkg.Rd man/ideal.Rd man/plot_ma.Rd man/plot_volcano.Rd man/read_gmt.Rd man/sepguesser.Rd man/sig_heatmap.Rd man/wrapup_for_iSEE.Rd tests/testthat.R tests/testthat/test_shiny.R vignettes/ideal-usersguide.Rmd

vignettes/ideal_logo_v2.png

vignettes/ss_05_overview.png

vignettes/ss_08_summaryplots.png

vignettes/ss_09_genefinder.png

vignettes/ss_10_funcanalysis.png

federicomarini/ideal documentation built on April 8, 2024, 3:14 a.m.