ctInputDE: Input expression data of gene/TE for differentially expressed...
In ferygood/TEKRABber: An R package estimates the correlations of orthologs and transposable elements between two species
ctInputDE R Documentation
Input expression data of gene/TE for differentially expressed analysis
within same species
Description
TEKRABber can also be used comparing orthologs and transposable elements
within same species, i.e., control and treatment. Here we provide an
example data for demonstration. This data was based on syn8466812
RNA-seq (Allen M et al., 2016). However, the expression data was modified
due to confidential agreement. Therefore, it cannot represent
the original data.
Usage
data(ctInputDE)
Format
An object contains 2 expression data:
- gene
-
input gene data for DE analysis comparing control and treatment
- te
-
input TE data for DE analysis comparing control and treatment
Examples
data(ctInputDE)
geneInputDE <- ctInputDE$gene
teInputDE <- ctInputDE$te
ferygood/TEKRABber documentation built on Jan. 29, 2024, 6:34 p.m.
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| ctInputDE | R Documentation |
Input expression data of gene/TE for differentially expressed analysis within same species
Description
TEKRABber can also be used comparing orthologs and transposable elements within same species, i.e., control and treatment. Here we provide an example data for demonstration. This data was based on syn8466812 RNA-seq (Allen M et al., 2016). However, the expression data was modified due to confidential agreement. Therefore, it cannot represent the original data.
Usage
data(ctInputDE)
Format
An object contains 2 expression data:
- gene
-
input gene data for DE analysis comparing control and treatment
- te
-
input TE data for DE analysis comparing control and treatment
Examples
data(ctInputDE)
geneInputDE <- ctInputDE$gene
teInputDE <- ctInputDE$te
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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