Description Details Slots See Also
Langmuir model object
check the manual for the detailed model specifications http://
kon
numeric association rate constant
koff
numeric dissociation rate constant
analyteConcentrations
numeric vector for different analyte concentrations.
s_d
numeric standard deviation of the Gaussian noise. by default s_d=0, which there is no noise.
Rmax
numeric the maximum RUs levels at the infinite
high analyte concentration. It is also the maximum level
of ligand immobilized on the chip surface
associationLength
numeric the time period to run the association
dissociationLength
numeric the time period to run the dissociation
R0
numeric vector the starting RUs for the dissocaiton phase. optional
offset
the level shifted at the begining of the dissociation phase optional
Rligand
the levels of ligand immobilized on the chip surface.
optional
If this one is set, then it assumes a variable "Rmax" model. Where
Rmax for different run is not fixed but rather different due to
some factors
such as regeration in (Sensiq) or stochasticity (in BioRad Proteon).
In this model, the immoblized ligand is not fixed from run to run,
but the effienciency or conversion constant is fixed.
This is a vector contains same number of element as the analyteConc.
efficiency
the conversion constant for a "variable" Rmax model
optional
see above for explanation.
ConformationalSelectionModel-class
TwoStateModel-class
InducedFitModel-class
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