plot.TROLLsim: Plot TROLL simulations stack

In fischer-fjd/RconTroll: Package for individual-based forest growth simulator TROLL (wip)

Description

Plot TROLL simulations stack

Usage

## S4 method for signature 'TROLLsim,missing'
plot(x, y, what, ggplot2 = FALSE,
  plotly = FALSE, ...)

## S4 method for signature 'TROLLsim,TROLLsim'
plot(x, y, what, ggplot2 = FALSE,
  plotly = FALSE, ...)

## S4 method for signature 'TROLLsimstack,missing'
plot(x, y, what, ggplot2 = FALSE,
  plotly = FALSE, ...)

## S4 method for signature 'TROLLsimstack,TROLLsimstack'
plot(x, y, what, ggplot2 = FALSE,
  plotly = FALSE, ...)

Arguments

x	TROLLsim or TROLLsimstack. Troll simulation stacked or not object to plot
y	Any, TROLLsim or TROLLsimstack. nothing, TROLL simulation or Troll aggregated simulation stack to compare with
what	char. ecosystem output to plot, see details
ggplot2	logical. creates ggplot graph
plotly	logical. use plotly library for interactive plots with ggplot
...	other graphical parameters

Details

Available plots:

agb

above ground biomass

gpp

gross primary productivity

abund, abu10, abu30

abundances (total, above 10 and above 30 cm dbh)

ba, ba10

basal area (total and above 10 cm dbh)

Rday, Rnight

night and day respiration

diversity, distdiversity

species diversity for different order of diversities (final and disturbed, require entropart)

rankabund, distrankabund

species rank-abundance diagram(final and disturbed)

height, distheight

tree height histogram (final and disturbed)

dbh, distdbh

tree dbh histogram (final and disturbed)

age, distage

tree age histogram (final and disturbed)

Value

Plot the simulations

Examples

NA

fischer-fjd/RconTroll documentation built on May 16, 2019, 12:57 p.m.