MSdata-class: MSdata class

In flajole/MSdata: Mass-spectrometry data analysis package

Description

MSdata-S4 class description, with it's accessors and replacement methods.

Usage

## S4 method for signature 'MSdata'
peakData(msdata)

## S4 replacement method for signature 'MSdata'
peakData(msdata) <- value

## S4 method for signature 'MSdata'
sampleData(msdata)

## S4 replacement method for signature 'MSdata'
sampleData(msdata) <- value

## S4 method for signature 'MSdata'
intMatrix(msdata)

## S4 replacement method for signature 'MSdata'
intMatrix(msdata) <- value

## S4 method for signature 'MSdata'
processLog(msdata)

## S4 replacement method for signature 'MSdata'
processLog(msdata) <- value

## S4 method for signature 'MSdata'
peakNames(msdata)

## S4 method for signature 'MSdata'
sampleNames(msdata)

## S4 method for signature 'MSdata'
npeak(msdata)

## S4 method for signature 'MSdata'
nsmpl(msdata)

Arguments

msdata	MSdata-class object
value	The data to replace data in corresponding slot of msdata

Slots

intMatrix

The matrix of peak intensities / compound concentrations.

peakData

Peak metadata.

sampleData

Sample metadata.

processLog

Processing log.

flajole/MSdata documentation built on May 16, 2019, 1:17 p.m.