bt88.03.704-package | float's utility functions Some useful little functions that... |
corner | Show upper left corner of a matrix |
count_significant | count significant genes |
expressionLines | Expression line plots |
filterDGE | Filter DGE |
fit.edger | edgeR wrapper |
fit.limma | Wrapper script for lmFit, contrast.fit and ebayes |
groupwiseScatter | groupwise Scatter plots |
heatslide | Heatmap with dotplot like visualization of effect sizes |
html_statement | HTML Statistical Statement |
list_fold | List fold (reduce) |
makeUCSClink | UCSC Browser link |
mclapply2 | ##' Wrapper around mclapply to track progress Based on... |
move_to_front | Move columns to front |
multiplot | Plot several ggplot objects in one device |
myTopTags | Top Tags from edgeR analysis |
newest_vfile | Newest (versioned) file |
normDist | Distance between raw and normalized data |
pdDist | paired distances |
plot_limma | Plot Limma |
plotNormDist | Plot normDist |
plotTopTags | TopTag heatmap |
print_limma | print limma table |
print.tbl_df | Print tbl_df objects |
readRandom | read random numbers |
recycle | recycle |
replicate2 | parallel replicate with progress |
Rtop | Print system load and user overview |
sd_confint | Standard deviation confidence interval |
setwd | modified setwd |
vfile | Make a versioned filename |
volcano_plot | Volcano plot |
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