lattice: Lattice methods

In flr/FLCore: Core Package of FLR, Fisheries Modelling in R

Lattice methods

Description

Implementation of Trellis graphics in FLR

Usage

## S4 method for signature 'formula,FLQuant'
xyplot(x, data, ...)

## S4 method for signature 'formula,FLCohort'
xyplot(x, data, ...)

## S4 method for signature 'formula,FLQuants'
xyplot(x, data, ...)

## S4 method for signature 'formula,FLComp'
xyplot(x, data, ...)

## S4 method for signature 'formula,FLQuant'
bwplot(x, data, ...)

## S4 method for signature 'formula,FLComp'
bwplot(x, data, ...)

## S4 method for signature 'formula,FLQuant'
dotplot(x, data, ...)

## S4 method for signature 'formula,FLComp'
dotplot(x, data, ...)

## S4 method for signature 'formula,FLQuant'
barchart(x, data, ...)

## S4 method for signature 'formula,FLComp'
barchart(x, data, ...)

## S4 method for signature 'formula,FLQuant'
stripplot(x, data, ...)

## S4 method for signature 'formula,FLComp'
stripplot(x, data, ...)

## S4 method for signature 'formula,FLQuant'
histogram(x, data, ...)

## S4 method for signature 'formula,FLComp'
histogram(x, data, ...)

## S4 method for signature 'formula,FLQuants'
histogram(x, data, ...)

## S4 method for signature 'formula,FLPar'
densityplot(x, data, ...)

Details

Plot methods in the lattice package are available for an object of classes FLQuant, FLQuants or those derived from FLComp.

See the help page in lattice for a full description of each plot method and all possible arguments.

Plot methods from lattice are called by passing a data.frame obtained by converting the FLR objects using as.data.frame. For details on this transformation, see as.data.frame-FLCore.

Generic function

barchart(x, data, ...)

bwplot(x, data, ...)

densityplot(x, data, ...)

dotplot(x, data, ...)

histogram(x, data, ...)

stripplot(x, data, ...)

xyplot(x, data, ...)

Author(s)

The FLR Team

See Also

xyplot, barchart, bwplot, densityplot, dotplot, histogram, stripplot

Examples

data(ple4)
# xyplot on FLQuant
  xyplot(data~year|age, catch.n(ple4)[, 1:20])
  xyplot(data~year|as.factor(age), catch.n(ple4)[, 1:20], type='b', pch=19,
    cex=0.5)

# bwplot on FLQuant with iter...
  flq <- rnorm(100, catch.n(ple4)[, 1:20], catch.n(ple4)[,1:20])
  bwplot(data~year|as.factor(age), flq)
# ...now with same style modifications
  bwplot(data~year|as.factor(age), flq, scales=list(relation='free',
    x=list(at=seq(1, 20, by=5),
    labels=dimnames(catch.n(ple4)[,1:20])$year[seq(1, 20, by=5)])),
    cex=0.5, strip=strip.custom(strip.names=TRUE, strip.levels=TRUE,
    var.name='age'))

flr/FLCore documentation built on May 4, 2024, midnight