Files in fredcommo/rCGH
Comprehensive Pipeline for Analyzing and Visualizing Array-Based CGH Data

DESCRIPTION
NAMESPACE
NEWS
R/.DS_Store
R/AllClasses.R R/AllGenerics.R R/AllHelperFunctions.R R/AllMethods.R R/AllSetters.R R/buildData.R R/plotFunctions.R R/zzz.R README.md
data/agilentDB_400K_GC.rda
data/datalist
data/hg18.rda
data/hg19.rda
data/hg38.rda
inst/.DS_Store
inst/doc/rCGH.R
inst/doc/rCGH.Rnw
inst/doc/rCGH.pdf
inst/extdata/.DS_Store
inst/extdata/Affy_cytoScan.cyhd.CN5.CNCHP.txt.bz2
inst/extdata/Affy_snp6_cnchp.txt.bz2
inst/extdata/Agilent4x180K.txt.bz2
inst/extdata/generic.txt.bz2
inst/extdata/oncoscan.tsv.bz2
inst/shinyProfile/.DS_Store
inst/shinyProfile/data/.DS_Store
inst/shinyProfile/data/empty.txt
inst/shinyProfile/helpers.R inst/shinyProfile/server.R inst/shinyProfile/ui.R
inst/shinyProfile/www/style.css
inst/unitTests/test_rCGH.R
man/.DS_Store
man/AllAccessors.Rd man/EMnormalize.Rd man/adjustSignal.Rd man/agilentDB.Rd man/byGeneTable.Rd man/hg18.Rd man/hg19.Rd man/hg38.Rd man/multiplot.Rd man/plotDensity.Rd man/plotLOH.Rd man/plotProfile.Rd man/rCGH-Agilent-class.Rd man/rCGH-SNP6-class.Rd man/rCGH-class.Rd man/rCGH-cytoScan-class.Rd man/rCGH-generic-class.Rd man/rCGH-oncoScan-class.Rd man/rCGH-package.Rd man/readAffyCytoScan.Rd man/readAffyOncoScan.Rd man/readAffySNP6.Rd man/readAgilent.Rd man/readGeneric.Rd man/recenter.Rd man/segmentCGH.Rd man/setInfo.Rd man/show-methods.Rd man/view.Rd tests/runTests.R
vignettes/.DS_Store
vignettes/figure/getProfile-1.png
vignettes/figure/plotDensity-1.png
vignettes/figure/recenter-1.png
vignettes/rCGH.Rnw
vignettes/view.png
vignettes/workflowOverview.pdf
fredcommo/rCGH documentation built on Nov. 25, 2017, 6:31 p.m.