Files in fredcommo/rCGH
Comprehensive Pipeline for Analyzing and Visualizing Array-Based CGH Data
DESCRIPTION
NAMESPACE
NEWS
R/AllClasses.R
R/AllGenerics.R
R/AllHelperFunctions.R
R/AllMethods.R
R/AllSetters.R
R/buildData.R
R/plotFunctions.R
R/zzz.R
README.md
data/agilentDB_400K_GC.rda
data/datalist
data/hg18.rda
data/hg19.rda
data/hg38.rda
inst/.DS_Store
inst/doc/rCGH.R
inst/doc/rCGH.Rnw
inst/doc/rCGH.pdf
inst/extdata/Affy_cytoScan.cyhd.CN5.CNCHP.txt.bz2
inst/extdata/Affy_snp6_cnchp.txt.bz2
inst/extdata/Agilent4x180K.txt.bz2
inst/extdata/generic.txt.bz2
inst/extdata/oncoscan.tsv.bz2
inst/shinyProfile/data/empty.txt
inst/shinyProfile/helpers.R
inst/shinyProfile/server.R
inst/shinyProfile/ui.R
inst/shinyProfile/www/style.css
inst/unitTests/test_rCGH.R
man/AllAccessors.Rd
man/EMnormalize.Rd
man/adjustSignal.Rd
man/agilentDB.Rd
man/byGeneTable.Rd
man/hg18.Rd
man/hg19.Rd
man/hg38.Rd
man/multiplot.Rd
man/plotDensity.Rd
man/plotLOH.Rd
man/plotProfile.Rd
man/rCGH-Agilent-class.Rd
man/rCGH-SNP6-class.Rd
man/rCGH-class.Rd
man/rCGH-cytoScan-class.Rd
man/rCGH-generic-class.Rd
man/rCGH-oncoScan-class.Rd
man/rCGH-package.Rd
man/readAffyCytoScan.Rd
man/readAffyOncoScan.Rd
man/readAffySNP6.Rd
man/readAgilent.Rd
man/readGeneric.Rd
man/recenter.Rd
man/segmentCGH.Rd
man/setInfo.Rd
man/show-methods.Rd
man/view.Rd
rCGH_1.9.4.tar.gz
tests/runTests.R
vignettes/.DS_Store
vignettes/figure/getProfile-1.png
vignettes/figure/plotDensity-1.png
vignettes/figure/recenter-1.png
vignettes/rCGH.Rnw
vignettes/view.png
vignettes/workflowOverview.pdf
