acession.convert: Map uniprot ID to HGNC symbol
In frhl/pRoteomics: Proteomics analysis using R
Description
Usage
Arguments
Value
Author(s)
See Also
Description
Input an acession matrix to subset it accordingly. It will
map uniprot IDs to their corresponding HGNC symbols.
Usage
1
acession.convert(mat, verbose = T)
Arguments
mat
an acession.matrix
Value
an acession matrix with two new columns:
1) from will indicate whether the uniprot ID was found and converted to HGNC, NA will indicate this
was not the case (i.e. the original symbol found in the acession string will be used).
2) hgnc the symbol derived after conversion from uniprot ID to HGNC.
Author(s)
flassen
See Also
Other id:
acession.matrix(),
detect()
frhl/pRoteomics documentation built on Feb. 19, 2020, 3:53 p.m.
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Description Usage Arguments Value Author(s) See Also
Description
Input an acession matrix to subset it accordingly. It will map uniprot IDs to their corresponding HGNC symbols.
Usage
1 | acession.convert(mat, verbose = T)
|
Arguments
mat |
an acession.matrix |
Value
an acession matrix with two new columns: 1) from will indicate whether the uniprot ID was found and converted to HGNC, NA will indicate this was not the case (i.e. the original symbol found in the acession string will be used). 2) hgnc the symbol derived after conversion from uniprot ID to HGNC.
Author(s)
flassen
See Also
Other id:
acession.matrix(),
detect()
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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