getMutMembership: Obtain the standard error estimates for parameters for...
In friend1ws/pmsignature: Extracting characteristic mutation signatures from a set of mutation data.
Description
Usage
Arguments
Value
Examples
Description
Obtain the standard error estimates for parameters for mutation signatures and memberships
Usage
1
getMutMembership(MutationFeatureData, EstimatedParameters)
Arguments
EstimatedParameters
the estimated parameters (EstimatedParameter class (S4 class)) by the getPMSignature function.
mutationFeatureData
the mutation data (MutationFeatureData class (S4 class)) by the readMPFile or readMFVFile functions.
Value
a data frame of mutation wise membership.
Examples
1
2
3
After obtaining mutationFeatureData (see e.g., by \code{readMPFile} function) as G,
and EstimatedParameters (e.g., by \code{getPMSignature} function) as Param,
mutMembership <- getMutMembership(G, Param)
friend1ws/pmsignature documentation built on May 16, 2019, 3:27 p.m.
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Description Usage Arguments Value Examples
Description
Obtain the standard error estimates for parameters for mutation signatures and memberships
Usage
1 | getMutMembership(MutationFeatureData, EstimatedParameters)
|
Arguments
EstimatedParameters |
the estimated parameters (EstimatedParameter class (S4 class)) by the |
mutationFeatureData |
the mutation data (MutationFeatureData class (S4 class)) by the |
Value
a data frame of mutation wise membership.
Examples
1 2 3 | After obtaining mutationFeatureData (see e.g., by \code{readMPFile} function) as G,
and EstimatedParameters (e.g., by \code{getPMSignature} function) as Param,
mutMembership <- getMutMembership(G, Param)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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