getSignaturesForMultipleK: Generate the figure of mutation signature for multiple K...
In friend1ws/pmsignature: Extracting characteristic mutation signatures from a set of mutation data.
Description
Generate the figure of mutation signature for multiple K aligning the signatures.
Usage
1
2
getSignaturesForMultipleK(inputFile, numBases = 5, trDir = TRUE,
startK = NULL, endK = 6)
Arguments
inputFile
the path for the input file (MP format)
numBases
the number of flanking bases
trDir
the index for the usage of transcription strand bias
startK
the minimum number of signatures
endK
the maximum number of signatures
friend1ws/pmsignature documentation built on May 16, 2019, 3:27 p.m.
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Description
Generate the figure of mutation signature for multiple K aligning the signatures.
Usage
1 2 | getSignaturesForMultipleK(inputFile, numBases = 5, trDir = TRUE,
startK = NULL, endK = 6)
|
Arguments
inputFile |
the path for the input file (MP format) |
numBases |
the number of flanking bases |
trDir |
the index for the usage of transcription strand bias |
startK |
the minimum number of signatures |
endK |
the maximum number of signatures |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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