TreeGhats.phylo: Global phylogeny of the TreeGhatsData database

Description Usage Format Details References See Also Examples

Description

The phylogenetic tree includes all the accepted taxon names at species level in the TreeGhatsData database.

Usage

1
data("TreeGhats.phylo")

Format

TreeGhats.phylo is an object of class phylo, which can be analyzed and plotted with tools available in ape package.

Details

The phylogeny has been generated by applying create.phylo.all to the accepted names in TreeGhatsData. It does not include infrataxa. It is based on the megaphylogeny of Qian and Jin (2016), and missing taxa are added with S.PhyloMaker with scenarios = "S3".

References

Qian H. & Jin Y. (2016). An updated megaphylogeny of plants, a tool for generating plant phylogenies, and an analysis of phylogenetic community structure. Journal of Plant Ecology. 9(2):233-239.

See Also

create.phylo.all, S.PhyloMaker, TreeGhatsData

Examples

1

frmunoz/TreeGhats documentation built on March 24, 2018, 5:24 a.m.