IntEREst-package: IntEREst

IntEREst-packageR Documentation

IntEREst

Description

Intron/Exon retention estimator quantifies and normalizes Intron retention and Exon junction read levels by analyzing mapped reads (.bam) files.

Details

Package: IntEREst
Type: Package
Version: 1.0
Date: 2015-11-18
License: GPL-2

To run the pipeline use functions interest() or interest.sequential(), i.e. wrapper functions that run all the necessary functions.

Author(s)

Ali Oghabian <Ali.Oghabian@Helsinki.Fi>, Dario Greco <dario.greco@helsinki.fi>, Mikko Frilander <Mikko.Frilander@helsinki.fi>

Maintainer: Ali Oghabian <Ali.Oghabian@Helsinki.Fi>, Mikko Frilander <Mikko.Frilander@helsinki.fi>


gacatag/IntEREst documentation built on July 29, 2024, 1:12 a.m.