get_disruption_p_value: Calculate transcription factor disruption p values for the...
In gaolong/arvin: Annotation of Regulatory Variants using Integrated Networks
View source: R/TFBindingDisruption.R
Description
Calculate transcription factor disruption p values for the SNPs
Usage
1
2
get_disruption_p_value(score_changes_file, bg_score_changes_dir,
output_filename)
Arguments
score_changes_file
file name containing the score changes between reference and alternate sequences around the input SNPs
bg_score_changes_dir
directory cotaining the background score changes between the reference and alternate sequences aroung the 1000 Genome SNPs
output_filename
the path to the file name to write the output
gaolong/arvin documentation built on May 28, 2019, 8:41 p.m.
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View source: R/TFBindingDisruption.R
Description
Calculate transcription factor disruption p values for the SNPs
Usage
1 2 | get_disruption_p_value(score_changes_file, bg_score_changes_dir,
output_filename)
|
Arguments
score_changes_file |
file name containing the score changes between reference and alternate sequences around the input SNPs |
bg_score_changes_dir |
directory cotaining the background score changes between the reference and alternate sequences aroung the 1000 Genome SNPs |
output_filename |
the path to the file name to write the output |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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