Optizyme uses a Gradient Descent algorithm to search for the optimal enzyme ratios for linear chain, cellfree pathways that conform to Michaelis Menten kinetics. Users should load a simulation of their pathway into their WD as "OFFunction" and provide kinetic constants in a matrix, vector, or csv file named "constants". This package includes a file of test values labeled "constants.csv".
Package details 


Author  Michelle Awh 
Maintainer  Michelle Awh <mawh@uchicago.edu> 
License  Genehackers 
Version  1.1.0 
Package repository  View on GitHub 
Installation 
Install the latest version of this package by entering the following in R:

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