genehackers/optizyme: Optizyme

Optizyme uses a Gradient Descent algorithm to search for the optimal enzyme ratios for linear chain, cell-free pathways that conform to Michaelis Menten kinetics. Users should load a simulation of their pathway into their WD as "OFFunction" and provide kinetic constants in a matrix, vector, or csv file named "constants". This package includes a file of test values labeled "constants.csv".

Getting started

Package details

AuthorMichelle Awh
MaintainerMichelle Awh <>
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
genehackers/optizyme documentation built on Oct. 24, 2020, 9 a.m.