Files in genesofeve/ProjectR
Functions for the projection of weights from PCA, CoGAPS, NMF, correlation, and clustering
.Rbuildignore
.github/workflows/r-build-check.yml
.gitignore
.lintr
.travis.yml
DESCRIPTION
LICENSE
NAMESPACE
R/AllGenerics.R
R/allClasses.R
R/alluvialMat.R
R/aucMat.R
R/cluster2pattern.R
R/clusterPlotR.R
R/correlateR.R
R/geneMatchR.R
R/helperFunctions.R
R/intersectoR.R
R/multivariateAnalysisR.R
R/package.R
R/plotting.R
R/projectR.R
R/projectionDriveRfun.R
R/rotatoR.R
README.md
data/.Rapp.history
data/AP.RNAseq6l3c3t.RData
data/CR.RNAseq6l3c3t.RData
data/cr_microglial.rda
data/glial_counts.rda
data/map.ESepiGen4c1l.RData
data/map.RNAseq6l3c3t.RData
data/microglial_counts.rda
data/multivariateAnalysisR_seurat_test.RData
data/p.ESepiGen4c1l.RData
data/p.RNAseq6l3c3t.RData
data/pd.ESepiGen4c1l.RData
data/pd.RNAseq6l3c3t.RData
data/retinal_patterns.rda
inst/CITATION
man/AP.RNAseq6l3c3t.Rd
man/CR.RNAseq6l3c3t.Rd
man/alluvialMat.Rd
man/aucMat.Rd
man/bonferroniCorrectedDifferences.Rd
man/cluster2pattern-class.Rd
man/cluster2pattern-methods.Rd
man/clusterPlotR-methods.Rd
man/correlateR-class.Rd
man/correlateR.Rd
man/cr_microglial.Rd
man/geneMatchR.Rd
man/getTSNE.Rd
man/getUMAP.Rd
man/glial_counts.Rd
man/initialize-cluster2pattern-method.Rd
man/initialize-correlateR-method.Rd
man/initialize-rotatoR-method.Rd
man/intersectoR-methods.Rd
man/map.ESepiGen4c1l.Rd
man/map.RNAseq6l3c3t.Rd
man/microglial_counts.Rd
man/multivariateAnalysisR.Rd
man/multivariateAnalysisR_seurat_test.Rd
man/p.ESepiGen4c1l.Rd
man/p.RNAseq6l3c3t.Rd
man/pd.ESepiGen4c1l.Rd
man/pd.RNAseq6l3c3t.Rd
man/pdVolcano.Rd
man/plotConfidenceIntervals.Rd
man/plotVolcano.Rd
man/projectR-methods.Rd
man/projectionDriveR.Rd
man/retinal_patterns.Rd
man/rotatoR-class.Rd
man/rotatoR.Rd
tests/testthat.R
tests/testthat/test_projectR.R
vignettes/projectR.Rmd
vignettes/projectR.bib
vignettes/projectR.html
vignettes/projectR.tex
