geneMatchR: Generic geneMatchR function

View source: R/geneMatchR.R

geneMatchRR Documentation

Generic geneMatchR function

Description

Matches genes accross datasets

Usage

geneMatchR(
  data1,
  data2,
  data1Names = NULL,
  data2Names = NULL,
  merge = FALSE,
  ...
)

Arguments

data1

a data matrix, typically genes by samples

data2

an amplitude matrix, typically genes by factors

data1Names

rownames of data matrix, for eg genenames

data2Names

rownames of amplitude matrix to be matched to rownames of datamatrix

merge

logical indicating wether or not to merged data sets

...

Additional arguments to geneMatchR

Value

A list of genes (intersection) in both datasets. (if merge = TRUE, Also returns merged data.)

Examples

geneMatchR(data1=p.ESepiGen4c1l$mRNA.Seq,data2=p.RNAseq6l3c3t,
data1Names=map.ESepiGen4c1l[["GeneSymbols"]])


genesofeve/ProjectR documentation built on June 8, 2024, 2:21 p.m.