R/package.R

In gerstung-lab/MutationTimeR: Timing somatic point mutations and copy number gains

#' Timing of point mutations and copy number gains from deep sequencing
#' 
#' This package provies functions to time copy number gains using point mutations.
#' @name MutationTimeR
#' @docType package
#' @title Timing of point mutations and copy number gains from deep sequencing
#' @author Moritz Gerstung, EMBL-EBI, \email{moritz.gerstung@@ebi.ac.uk}
#' @references Gerstung M, et al. The evolutionary history of 2578 cancers. \href{http://dx.doi.org/10.1038/ncomms1814}{DOI:10.1038/ncomms1814}.
#' @keywords package
#' @seealso \code{\link{mutationTime}}
#' @example inst/example/example.R
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#' Reference lengths for hg37d5
#' 
#' @docType data
#' @examples data(refLengths)
#' refLengths
#' @name refLengths
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