TCGA_GENERIC_MET_ClusterProbes_Helper_ClusterGenes_with_hclust: The...
In gevaertlab/methylmix: MethylMix: Identifying methylation driven cancer genes
Description
Usage
Arguments
Value
View source: R/Download_Preprocess.R
Description
Internal. Cluster probes into genes.
Usage
1
2
TCGA_GENERIC_MET_ClusterProbes_Helper_ClusterGenes_with_hclust(Gene,
ProbeAnnotation, MET_Cancer, MET_Normal = NULL, CorThreshold = 0.4)
Arguments
Gene
gene.
ProbeAnnotation
data set matching probes to genes.
MET_Cancer
data matrix for cancer samples.
MET_Normal
data matrix for normal samples.
CorThreshold
correlation threshold for cutting the clusters.
Value
List with the clustered data sets and the mapping between probes and genes.
gevaertlab/methylmix documentation built on May 25, 2019, 5:25 p.m.
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Description Usage Arguments Value
View source: R/Download_Preprocess.R
Description
Internal. Cluster probes into genes.
Usage
1 2 | TCGA_GENERIC_MET_ClusterProbes_Helper_ClusterGenes_with_hclust(Gene,
ProbeAnnotation, MET_Cancer, MET_Normal = NULL, CorThreshold = 0.4)
|
Arguments
Gene |
gene. |
ProbeAnnotation |
data set matching probes to genes. |
MET_Cancer |
data matrix for cancer samples. |
MET_Normal |
data matrix for normal samples. |
CorThreshold |
correlation threshold for cutting the clusters. |
Value
List with the clustered data sets and the mapping between probes and genes.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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